Think You Can’t Afford a Single-Crystal Diffractometer? Meet the XtaLAB mini II

WB_25_Banner_XtaLAB_mini_II_Summary

This is a written summary of a live webinar presented on October 30, 2025. The recording and resources are available on the recording page.

Presented by:

Rigaku
Director of Scientific Support, Life Sciences
Eric Reinheimer
Co-Presenter:: Eric Reinheimer, PhD
Rigaku
Sales Manager for Western US and Canada - Single Crystal

Webinar summary

This webinar makes an evidence-based case that a modern benchtop single crystal diffractometer is within reach for labs that have assumed they can’t afford one. The presenters introduce the Rigaku XtaLAB mini II at a price point in the low six figures and tackle the only question that really matters to researchers: does it deliver publishable data? Their answer is yes. The instrument uses a molybdenum fine-focus sealed tube, a curved graphite monochromator, a simple, collision-safe two-axis goniometer with a fixed 54° chi, and a hybrid photon-counting detector with no dark noise. It fits on a bench, runs with a small chiller, has interlocks that prevent accidental X-ray exposure, requires little maintenance, and is compatible with standard cryosystems. The control and data-reduction software automates screening, indexing, strategy calculation, integration, scaling and even structure solution as data accumulate, so beginners can get competent results without a resident crystallographer hovering over their shoulder.

A live demo walked through mounting and centering an organic standard and showed the software auto-indexing, proposing a multi-scan strategy, and reprocessing every ~25 images while the dataset grew—exactly the kind of hand-holding that lowers the barrier for first-time users. They also confirmed you can schedule variable-temperature series, analyze twins, and handle air-sensitive samples with a cryostream. There are limits: the system is Mo-only and the beam is weaker than a microfocus rotating-anode or a beamline. That means very small or poorly diffracting crystals take time, and a subset will be better served by a higher-flux source. But the presenters were direct about that trade-off and showed where the XtaLAB mini II succeeds anyway.

Performance examples were the backbone of the presentation. Low-symmetry organics in P1 and P1 reached ~99% completeness and sensible R1 values with modest crystal sizes and overnight runs. An especially nasty thin, streaky crystal still yielded a solved structure after ~39 hours—proof that time can substitute for flux up to a point. In contrast, organometallics with stronger scattering solved cleanly in 2–3 hours with R1 near 3–4%.

Users reported large primitive cells into the ~40 Å range being resolvable on the fixed detector. One testimonial came from Prof. Claire Besson (SUNY Binghamton), who brought SCXRD in-house on startup funds and, with graduate students, measured ~40 structures in short order—everything from uranium complexes to 2D materials—rarely needing cryo, and even solving a twinned ~20×20 µm needle after a week of acquisition. Another came from Prof. Jason Halfen (UW–Eau Claire), who has run more than 600 samples over five years in an undergraduate environment, with students routinely determining their own structures as part of capstone labs, minimal service interventions, and the original tube still in use—clear signals of low operating cost. Pierre emphasized remote help via TeamViewer for strategy, indexing, and tricky datasets, plus training that leaves new owners genuinely independent.

If your lab mostly needs routine small-molecule structures and you want the speed and control of doing SCXRD in-house, the XtaLAB mini II is a pragmatic way to get there. For most use cases—teaching labs, synthetic groups, and departments tired of shipping crystals out—the webinar shows the XtaLAB mini II producing IUCr-grade data reliably, safely, and at a price many assumed was out of reach.

Key questions answered in the webinar

It’s positioned in the low six figures, which makes it attractive to labs that assumed a single-crystal diffractometer was out of reach but want research-grade data in a benchtop footprint. The webinar framed it as a way to bring “research level instrumentation” to teaching departments, synthetic groups, and cost-constrained labs without chasing external facility time.

The XtaLAB mini is designed to collect high-quality X-ray crystallography data that fulfills the IUCR requirements for publication.

  • Performance examples: Even with very thin or difficult crystals, high-quality results can be achieved by allowing for longer data collection times. Examples include:
    • A P1 (lowest symmetry) organic crystal (60 µm thick) solved with 99% completeness and an R1 factor of basically 4% in 6.5 hours.
    • A crystal with streaks and split reflections (40 µm thick) that took 39 hours but was successfully solved, yielding an R1 of about 7.5%.
    • Easier organometallic coordination compounds yielded R1 factors below 4% and even less than 3% in just a few hours (2 to 3 hours).
  • Publication record: When searching for "XtaLAB mini" on Google Scholar, 1190 results related to publications mentioning data collected on the instrument are found.

The system is a benchtop diffractometer with a weight of about 220 pounds (100 kilograms).

  • Source: The source is a fine focus sealed tube that uses molybdenum (Mo) radiation. It generates a flat X-ray beam with a diameter of about 5 µm. This source has a fixed configuration.
  • Monochromator: It uses a curved graphite monochromator, specifically a SHINE optic curved monochromator.
  • Goniometer: The goniometer has only two rotating axes: φ (rotating throughout 360°) and ω (rotating up to 180°), which serves as the data collection axis. Because there are only two rotating axes, there is no possibility of hardware collision. The χ angle is fixed at the "magic angle" of 54° to optimize data set completeness.
  • Detector: The system utilizes a hybrid photon counting detector called the HyPix-Bantam, which employs the same technology found in most synchrotron beam line detectors. This detector is fixed at a 2θ angle of 20° and a distance of 45 mm, allowing for data to be collected to 0.10 Å resolution . This technology offers high sensitivity and, importantly, does not generate electronic noise, leading to better I/ σ statistics and the ability to detect weak, high-resolution reflections. The detector does not require cooling or vacuum chambers.
  • Safety: The system is built to be safe and secure, even for beginning students. It is impossible to be accidentally exposed to the X-ray beam; the door must be locked for the shutter to open, and the door cannot be unlocked or opened during data collection unless the process is first aborted from the program.
  • Automation: CrysAlisPro performs automatic indexing and calculates a data collection strategy behind the scenes. It also automatically starts data reduction after the first 25 images are recorded and reprocesses the data set after every batch of 25 images, updating completeness and scaling statistics as data accumulates.
  • Structure solution: The program tries to solve the structure during data collection by using Autochem (an automated version of Olex2) or by plugging in the SHELX executables. Users can aid this process by entering the chemical components of the crystal.
  • Variable temperature: CrysAlisPro makes variable temperature experiments easy to set up. A collection strategy can be linked to a set of temperature set points, and the program will automatically collect each data set and change the temperature without user intervention

In low symmetry P1 and P1 organics, they showed ~99% completeness with good R1 in hours to an overnight, while a very problematic thin, streaky crystal still solved after ~39 hours—proof that time can substitute for flux up to a point. Organometallics with stronger scattering solved in roughly 2–3 hours with R1 ~3–4%.

 The system can analyze "fairly well-behaved MOF crystals," although the flux is weaker due to the fine focus sealed tube and molybdenum radiation. MOF crystals that are tougher or diffract weakly might not be adequate for this system, potentially requiring a stronger beam. 

 The system can analyze twin crystals. However, the use of molybdenum radiation means that reflections are closer together, which may complicate the analysis of some twins. This is a limitation due to the radiation type, not the system itself, as the same issue would arise on a larger diffractometer using molybdenum radiation. 

It’s a fixed-configuration, Mo-only sealed-tube system, so flux is lower than microfocus sealed tube sources or copper beams. Very weakly diffracting tiny crystals will push the envelope and are better served on higher-flux instruments. You can analyze twins, but with Mo’s shorter wavelength the reflections sit closer together, which can make some twins tougher—an issue of the radiation, not the platform.

Users reported primitive orthorhombic cells with a long axis of 42.8 Å resolved cleanly, with ~30–35 Å being routine depending on mosaicity. On size, one lab solved a twinned ~20×20 μm needle after a week of acquisition—exceptional but possible.

Air-sensitive samples are handled the usual way with a cryostream, and automated sequences can step temperature between datasets without user intervention.

An undergraduate program logged more than 600 samples in five years, mostly at room temperature, is still on the original tube, and reports few service events—issues are typically resolved by phone or remote session. Another new owner measured about 40 structures across uranium complexes, 2D materials, and small organics within months and already had papers in the pipeline. These accounts underline low operating costs, robust uptime, and real impact on training and collaboration.

Crystallography times editor

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